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Bacterial retrons encode phage-defending tripartite toxin-antitoxin systems.

Bobonis J, Mitosch K, Mateus A, Karcher N, Kritikos G, Selkrig J, Zietek M, Monzon V, Pfalz B, Garcia-Santamarina S, Galardini M, Sueki A, Kobayashi C, Stein F, Bateman A, Zeller G, Savitski MM, Elfenbein JR, Andrews-Polymenis HL, Typas A. Bobonis J, et al. Among authors: monzon v. Nature. 2022 Sep;609(7925):144-150. doi: 10.1038/s41586-022-05091-4. Epub 2022 Jul 18. Nature. 2022. PMID: 35850148 Free PMC article.

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Discovery of fibrillar adhesins across bacterial species.

Monzon V, Lafita A, Bateman A. Monzon V, et al. BMC Genomics. 2021 Jul 18;22(1):550. doi: 10.1186/s12864-021-07586-2. BMC Genomics. 2021. PMID: 34275445 Free PMC article.

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Domain shuffling of a highly mutable ligand-binding fold drives adhesin generation across the bacterial kingdom.

Barringer R, Parnell AE, Lafita A, Monzon V, Back CR, Madej M, Potempa J, Nobbs AH, Burston SG, Bateman A, Race PR. Barringer R, et al. Among authors: monzon v. Proteins. 2023 Aug;91(8):1007-1020. doi: 10.1002/prot.26487. Epub 2023 Mar 20. Proteins. 2023. PMID: 36912614 Free PMC article.

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Folding the unfoldable: using AlphaFold to explore spurious proteins.

Monzon V, Haft DH, Bateman A. Monzon V, et al. Bioinform Adv. 2022 Jan 9;2(1):vbab043. doi: 10.1093/bioadv/vbab043. eCollection 2022. Bioinform Adv. 2022. PMID: 36699409 Free PMC article.

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Large-Scale Discovery of Microbial Fibrillar Adhesins and Identification of Novel Members of Adhesive Domain Families.

Monzon V, Bateman A. Monzon V, et al. J Bacteriol. 2022 Jun 21;204(6):e0010722. doi: 10.1128/jb.00107-22. Epub 2022 May 24. J Bacteriol. 2022. PMID: 35608365 Free PMC article.

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Reciprocal best structure hits: using AlphaFold models to discover distant homologues.

Monzon V, Paysan-Lafosse T, Wood V, Bateman A. Monzon V, et al. Bioinform Adv. 2022 Oct 6;2(1):vbac072. doi: 10.1093/bioadv/vbac072. eCollection 2022. Bioinform Adv. 2022. PMID: 36408459 Free PMC article.

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The effect of landscape and human settlement on the genetic differentiation and presence of Paragonimus species in Mesoamerica.

Landaverde-González P, Osgood J, Montenegro Quiñonez CA, Monzón V, Rodas A, Monroy C. Landaverde-González P, et al. Among authors: monzon v. Int J Parasitol. 2022 Jan;52(1):13-21. doi: 10.1016/j.ijpara.2021.05.010. Epub 2021 Aug 6. Int J Parasitol. 2022. PMID: 34371019

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The primary transcriptome, small RNAs and regulation of antimicrobial resistance in Acinetobacter baumannii ATCC 17978.

Kröger C, MacKenzie KD, Alshabib EY, Kirzinger MWB, Suchan DM, Chao TC, Akulova V, Miranda-CasoLuengo AA, Monzon VA, Conway T, Sivasankaran SK, Hinton JCD, Hokamp K, Cameron ADS. Kröger C, et al. Among authors: monzon va. Nucleic Acids Res. 2018 Oct 12;46(18):9684-9698. doi: 10.1093/nar/gky603. Nucleic Acids Res. 2018. PMID: 29986115 Free PMC article.

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The small DUF1127 protein CcaF1 from Rhodobacter sphaeroides is an RNA-binding protein involved in sRNA maturation and RNA turnover.

Grützner J, Billenkamp F, Spanka DT, Rick T, Monzon V, Förstner KU, Klug G. Grützner J, et al. Among authors: monzon v. Nucleic Acids Res. 2021 Apr 6;49(6):3003-3019. doi: 10.1093/nar/gkab146. Nucleic Acids Res. 2021. PMID: 33706375 Free PMC article.

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Characterization of the transcriptome of Haloferax volcanii, grown under four different conditions, with mixed RNA-Seq.

Laass S, Monzon VA, Kliemt J, Hammelmann M, Pfeiffer F, Förstner KU, Soppa J. Laass S, et al. Among authors: monzon va. PLoS One. 2019 Apr 30;14(4):e0215986. doi: 10.1371/journal.pone.0215986. eCollection 2019. PLoS One. 2019. PMID: 31039177 Free PMC article.

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